Thread: C++, Postgres , libpqxx huge query
Hello experts. I have posted this question on stack overflow, but I did not get any detailed answer, so I thought I should cross post here. My apologies. I have to execute an SQL query to Postgres by the following code. The query returns a huge number of rows (40M or more) and has 4 integer fields: When I use a workstation with 32Gb everything works but on a 16Gb workstation the query is very slow (due to swapping I guess). Is there any way to tell the C++ to load rows at batches, without waiting the entire dataset? With Java I never had these issues before, due to the probably better JDBC driver. try { work W(*Conn); result r = W.exec(sql[sqlLoad]); W.commit(); for (int rownum = 0; rownum < r.size(); ++rownum) { const result::tuple row = r[rownum]; vid1 = row[0].as<int>(); vid2 = row[1].as<int>(); vid3 = row[2].as<int>(); ..... } catch (const std::exception &e) { std::cerr << e.what() << std::endl; } I am using PostgreSQL 9.3 and there I see this http://www.postgresql.org/docs/9.3/static/libpq-single-row-mode.html, but I do not how to use it on my C++ code. Your help will be appreciated. EDIT: This query runs only once, for creating the necessary main memory data structures. As such, tt cannot be optimized. Also, pgAdminIII could easily fetch those rows, in under one minute on the same (or with smaller RAM) PCs. Also, Java could easily handle twice the number of rows (with Statent.setFetchSize() http://docs.oracle.com/javase/7/docs/api/java/sql/Statement.html#setFetchSize%28int%29) So, it is really an issue for the libpqxx library and not an application issue. Is there a way to enforce this functionality in C++, without explicitly setting limits / offsets manually? Also, is there another driver I should use with C++ that offers this kind of functionality? -- View this message in context: http://postgresql.1045698.n5.nabble.com/C-Postgres-libpqxx-huge-query-tp5802330.html Sent from the PostgreSQL - general mailing list archive at Nabble.com.
On 04 May 2014, at 10:57, alexandros_e <alexandros.ef@gmail.com> wrote: > Hello experts. I have posted this question on stack overflow, but I did not > get any detailed answer, so I thought I should cross post here. My > apologies. > > I have to execute an SQL query to Postgres by the following code. The query > returns a huge number of rows (40M or more) and has 4 integer fields: When I > use a workstation with 32Gb everything works but on a 16Gb workstation the > query is very slow (due to swapping I guess). Is there any way to tell the > C++ to load rows at batches, without waiting the entire dataset? With Java I > never had these issues before, due to the probably better JDBC driver. > > try { > work W(*Conn); > result r = W.exec(sql[sqlLoad]); > W.commit(); > > for (int rownum = 0; rownum < r.size(); ++rownum) { > const result::tuple row = r[rownum]; > vid1 = row[0].as<int>(); > vid2 = row[1].as<int>(); > vid3 = row[2].as<int>(); > ..... > > } catch (const std::exception &e) { > std::cerr << e.what() << std::endl; > } > > I am using PostgreSQL 9.3 and there I see this > http://www.postgresql.org/docs/9.3/static/libpq-single-row-mode.html, but I > do not how to use it on my C++ code. Your help will be appreciated. I think the section of relevance is: http://www.postgresql.org/docs/9.3/static/libpq-async.html Alban Hertroys -- If you can't see the forest for the trees, cut the trees and you'll find there is no forest.
Hi, On 2014-05-04 01:57:43 -0700, alexandros_e wrote: > I have to execute an SQL query to Postgres by the following code. The query > returns a huge number of rows (40M or more) and has 4 integer fields: When I > use a workstation with 32Gb everything works but on a 16Gb workstation the > query is very slow (due to swapping I guess). Is there any way to tell the > C++ to load rows at batches, without waiting the entire dataset? With Java I > never had these issues before, due to the probably better JDBC driver. Try looking into either using a serverside cursor or COPY. Greetings, Andres Freund -- Andres Freund http://www.2ndQuadrant.com/ PostgreSQL Development, 24x7 Support, Training & Services
Andres Freund <andres@2ndquadrant.com> writes: > On 2014-05-04 01:57:43 -0700, alexandros_e wrote: >> I have to execute an SQL query to Postgres by the following code. The query >> returns a huge number of rows (40M or more) and has 4 integer fields: When I >> use a workstation with 32Gb everything works but on a 16Gb workstation the >> query is very slow (due to swapping I guess). Is there any way to tell the >> C++ to load rows at batches, without waiting the entire dataset? With Java I >> never had these issues before, due to the probably better JDBC driver. > Try looking into either using a serverside cursor or COPY. Another possibility is libpq's recently-introduced row-at-a-time mode: http://www.postgresql.org/docs/9.3/static/libpq-single-row-mode.html though I'm not sure how effectively that's supported by libpqxx. regards, tom lane
To answer my own question, I adapted How to use pqxx::stateless_cursor class from libpqxx? try { work W(*Conn); pqxx::stateless_cursor<pqxx::cursor_base::read_only, pqxx::cursor_base::owned> cursor(W, sql[sqlLoad], "mycursor", false); /* Assume you know total number of records returned */ for (size_t idx = 0; idx < countRecords; idx += 100000) { /* Fetch 100,000 records at a time */ result r = cursor.retrieve(idx, idx + 100000); for (int rownum = 0; rownum < r.size(); ++rownum) { const result::tuple row = r[rownum]; vid1 = row[0].as<int>(); vid2 = row[1].as<int>(); vid3 = row[2].as<int>(); ............. } } } catch (const std::exception &e) { std::cerr << e.what() << std::endl; } -- View this message in context: http://postgresql.1045698.n5.nabble.com/C-Postgres-libpqxx-huge-query-tp5802330p5802392.html Sent from the PostgreSQL - general mailing list archive at Nabble.com.
Thanks John for your answer. The problem is how do I declare the cursor and fetch through C++ and libpq++? And if I fetch 1000 rows at a time, then how do I handle that when I reach the end and there are less than 1000 rows available? Or I need to fetch one row at a time like this http://stackoverflow.com/questions/16128142/how-to-use-pqxxstateless-cursor-class-from-libpqxx?
A.
2014-05-04 12:11 GMT+03:00 John R Pierce <pierce@hogranch.com>:
On 5/4/2014 1:57 AM, alexandros_e wrote:see DECLARE and FETCH.I have to execute an SQL query to Postgres by the following code. The query
returns a huge number of rows (40M or more) and has 4 integer fields: When I
use a workstation with 32Gb everything works but on a 16Gb workstation the
query is very slow (due to swapping I guess). Is there any way to tell the
C++ to load rows at batches, without waiting the entire dataset? With Java I
never had these issues before, due to the probably better JDBC driver.
http://www.postgresql.org/docs/current/static/sql-declare.html
http://www.postgresql.org/docs/current/static/sql-fetch.html
--
john r pierce 37N 122W
somewhere on the middle of the left coast
To answer my own question, I adapted http://stackoverflow.com/questions/16128142/how-to-use-pqxxstateless-cursor-class-from-libpqxx
try {
work W(*Conn);
pqxx::stateless_cursor<pqxx::cursor_base::read_only, pqxx::cursor_base::owned>
cursor(W, sql[sqlLoad], "mycursor", false);
/* Assume you know total number of records returned */
for (size_t idx = 0; idx < countRecords; idx += 100000) {
/* Fetch 100,000 records at a time */
result r = cursor.retrieve(idx, idx + 100000);
for (int rownum = 0; rownum < r.size(); ++rownum) {
const result::tuple row = r[rownum];
vid1 = row[0].as<int>();
vid2 = row[1].as<int>();
vid3 = row[2].as<int>();
.............
}
}
} catch (const std::exception &e) {
std::cerr << e.what() << std::endl;
}
try {
work W(*Conn);
pqxx::stateless_cursor<pqxx::cursor_base::read_only, pqxx::cursor_base::owned>
cursor(W, sql[sqlLoad], "mycursor", false);
/* Assume you know total number of records returned */
for (size_t idx = 0; idx < countRecords; idx += 100000) {
/* Fetch 100,000 records at a time */
result r = cursor.retrieve(idx, idx + 100000);
for (int rownum = 0; rownum < r.size(); ++rownum) {
const result::tuple row = r[rownum];
vid1 = row[0].as<int>();
vid2 = row[1].as<int>();
vid3 = row[2].as<int>();
.............
}
}
} catch (const std::exception &e) {
std::cerr << e.what() << std::endl;
}
2014-05-04 17:34 GMT+03:00 Tom Lane <tgl@sss.pgh.pa.us>:
Andres Freund <andres@2ndquadrant.com> writes:Another possibility is libpq's recently-introduced row-at-a-time mode:
> On 2014-05-04 01:57:43 -0700, alexandros_e wrote:
>> I have to execute an SQL query to Postgres by the following code. The query
>> returns a huge number of rows (40M or more) and has 4 integer fields: When I
>> use a workstation with 32Gb everything works but on a 16Gb workstation the
>> query is very slow (due to swapping I guess). Is there any way to tell the
>> C++ to load rows at batches, without waiting the entire dataset? With Java I
>> never had these issues before, due to the probably better JDBC driver.
> Try looking into either using a serverside cursor or COPY.
http://www.postgresql.org/docs/9.3/static/libpq-single-row-mode.html
though I'm not sure how effectively that's supported by libpqxx.
regards, tom lane