On 10.10.2014 19:59, Craig James wrote:
> On Fri, Oct 10, 2014 at 9:53 AM, Tomas Vondra <tv@fuzzy.cz
> <mailto:tv@fuzzy.cz>> wrote:
>
>
> On 10.10.2014 16:21, Craig James wrote:
> > Our index is for chemical structures. Chemicals are indexed on
> > chemical fragments
> > <http://emolecules.com/info/molecular-informatics>. A search
> > typically starts with 50-200 indexed "columns" (chemical fragments).
> > The query is always flat, "A and B and ... and Z". The indexed
> > fragments are both correlated (the existence of one strongly raises
> > the chances of another) and anti-correlated (certain combinations are
> > very rare).
>
> Maybe I don't understand the problem well enough, but isn't this a
> perfect match for GIN indexes? I mean, you essentially need to do
> queries like "WHERE substance @@ ('A & B & !C')" etc. Which is exactly
> what GIN does, because it keeps pointers to tuples for each fragment.
>
>
> On the day our web site opened we were using tsearch. Before the end of
> the day we realized it was a bad idea, for the very reasons discussed
> here. The early-abort/late-start problem ("offset N limit M") could take
> minutes to return the requested page. With the external
> dynamically-optimized index, we can almost always get answers in less
> than a couple seconds, often in 0.1 seconds.
In the early days of tsearch, it did not support GIN indexes, and AFAIK
GiST are not nearly as fast for such queries. Also, the GIN fastscan
implemented by Alexander Korotkov in 9.4 makes a huge difference for
queries combining frequent and rare terms.
Maybe it'd be interesting to try this on 9.4. I'm not saying it will
make it faster than the optimized index, but it might be an interesting
comparison.
Tomas
