Fix for large file support - Mailing list pgsql-patches

From Zdenek Kotala
Subject Fix for large file support
Date
Msg-id 461640E9.3000707@sun.com
Whole thread Raw
Responses Re: Fix for large file support  (Andrew Dunstan <andrew@dunslane.net>)
List pgsql-patches
Current version of postgres support only 1GB chunks. This limit is
defined in the pg_config_manual.h header file. However this setting
allows to have maximal 2GB chunks. Main problem is that md storage
manager and buffile use "long" data type (32bits) for offset instead
"off_t" defined in <sys/types.h>.

off_t is 32bits long on 32bits OS and 64bits long on 64bits OS or when
application is compiled with large file support.

Attached patch allow to setup bigger chunks than 4GB on OS with large
file support.

I tested it on 7GB table and it works.


Please, look on it and let me know your comments or if I miss something.


TODO/questions:

1) clean/update comments about limitation

2) Is there some doc for update?

3) I would like to add some check compare sizeof(off_t) and chunk size
setting and protect postgres with missconfigured chunk size. Is mdinit()
good place for this check?

4) I'm going to take bigger machine for test with really big table.


    with regards Zdenek


Index: src/backend/storage/file/buffile.c
===================================================================
RCS file: /projects/cvsroot/pgsql/src/backend/storage/file/buffile.c,v
retrieving revision 1.25
diff -c -r1.25 buffile.c
*** src/backend/storage/file/buffile.c    5 Jan 2007 22:19:37 -0000    1.25
--- src/backend/storage/file/buffile.c    6 Apr 2007 12:08:47 -0000
***************
*** 42,48 ****
   * Note we adhere to this limit whether or not LET_OS_MANAGE_FILESIZE
   * is defined, although md.c ignores it when that symbol is defined.
   */
! #define MAX_PHYSICAL_FILESIZE  (RELSEG_SIZE * BLCKSZ)

  /*
   * This data structure represents a buffered file that consists of one or
--- 42,48 ----
   * Note we adhere to this limit whether or not LET_OS_MANAGE_FILESIZE
   * is defined, although md.c ignores it when that symbol is defined.
   */
! #define MAX_PHYSICAL_FILESIZE  ((off_t)RELSEG_SIZE * BLCKSZ)

  /*
   * This data structure represents a buffered file that consists of one or
***************
*** 54,60 ****
      int            numFiles;        /* number of physical files in set */
      /* all files except the last have length exactly MAX_PHYSICAL_FILESIZE */
      File       *files;            /* palloc'd array with numFiles entries */
!     long       *offsets;        /* palloc'd array with numFiles entries */

      /*
       * offsets[i] is the current seek position of files[i].  We use this to
--- 54,60 ----
      int            numFiles;        /* number of physical files in set */
      /* all files except the last have length exactly MAX_PHYSICAL_FILESIZE */
      File       *files;            /* palloc'd array with numFiles entries */
!     off_t       *offsets;        /* palloc'd array with numFiles entries */

      /*
       * offsets[i] is the current seek position of files[i].  We use this to
***************
*** 70,76 ****
       * Position as seen by user of BufFile is (curFile, curOffset + pos).
       */
      int            curFile;        /* file index (0..n) part of current pos */
!     int            curOffset;        /* offset part of current pos */
      int            pos;            /* next read/write position in buffer */
      int            nbytes;            /* total # of valid bytes in buffer */
      char        buffer[BLCKSZ];
--- 70,76 ----
       * Position as seen by user of BufFile is (curFile, curOffset + pos).
       */
      int            curFile;        /* file index (0..n) part of current pos */
!     off_t        curOffset;        /* offset part of current pos */
      int            pos;            /* next read/write position in buffer */
      int            nbytes;            /* total # of valid bytes in buffer */
      char        buffer[BLCKSZ];
***************
*** 95,101 ****
      file->numFiles = 1;
      file->files = (File *) palloc(sizeof(File));
      file->files[0] = firstfile;
!     file->offsets = (long *) palloc(sizeof(long));
      file->offsets[0] = 0L;
      file->isTemp = false;
      file->dirty = false;
--- 95,101 ----
      file->numFiles = 1;
      file->files = (File *) palloc(sizeof(File));
      file->files[0] = firstfile;
!     file->offsets = (off_t *) palloc(sizeof(off_t));
      file->offsets[0] = 0L;
      file->isTemp = false;
      file->dirty = false;
***************
*** 121,128 ****

      file->files = (File *) repalloc(file->files,
                                      (file->numFiles + 1) * sizeof(File));
!     file->offsets = (long *) repalloc(file->offsets,
!                                       (file->numFiles + 1) * sizeof(long));
      file->files[file->numFiles] = pfile;
      file->offsets[file->numFiles] = 0L;
      file->numFiles++;
--- 121,128 ----

      file->files = (File *) repalloc(file->files,
                                      (file->numFiles + 1) * sizeof(File));
!     file->offsets = (off_t *) repalloc(file->offsets,
!                                       (file->numFiles + 1) * sizeof(off_t));
      file->files[file->numFiles] = pfile;
      file->offsets[file->numFiles] = 0L;
      file->numFiles++;
***************
*** 273,281 ****
          bytestowrite = file->nbytes - wpos;
          if (file->isTemp)
          {
!             long        availbytes = MAX_PHYSICAL_FILESIZE - file->curOffset;

!             if ((long) bytestowrite > availbytes)
                  bytestowrite = (int) availbytes;
          }

--- 273,281 ----
          bytestowrite = file->nbytes - wpos;
          if (file->isTemp)
          {
!             off_t        availbytes = MAX_PHYSICAL_FILESIZE - file->curOffset;

!             if ((off_t) bytestowrite > availbytes)
                  bytestowrite = (int) availbytes;
          }

***************
*** 445,454 ****
   * impossible seek is attempted.
   */
  int
! BufFileSeek(BufFile *file, int fileno, long offset, int whence)
  {
      int            newFile;
!     long        newOffset;

      switch (whence)
      {
--- 445,454 ----
   * impossible seek is attempted.
   */
  int
! BufFileSeek(BufFile *file, int fileno, off_t offset, int whence)
  {
      int            newFile;
!     off_t        newOffset;

      switch (whence)
      {
***************
*** 531,537 ****
  }

  void
! BufFileTell(BufFile *file, int *fileno, long *offset)
  {
      *fileno = file->curFile;
      *offset = file->curOffset + file->pos;
--- 530,536 ----
  }

  void
! BufFileTell(BufFile *file, int *fileno, off_t *offset)
  {
      *fileno = file->curFile;
      *offset = file->curOffset + file->pos;
***************
*** 544,559 ****
   * the file.  Note that users of this interface will fail if their files
   * exceed BLCKSZ * LONG_MAX bytes, but that is quite a lot; we don't work
   * with tables bigger than that, either...
   *
   * Result is 0 if OK, EOF if not.  Logical position is not moved if an
   * impossible seek is attempted.
   */
  int
! BufFileSeekBlock(BufFile *file, long blknum)
  {
      return BufFileSeek(file,
                         (int) (blknum / RELSEG_SIZE),
!                        (blknum % RELSEG_SIZE) * BLCKSZ,
                         SEEK_SET);
  }

--- 543,558 ----
   * the file.  Note that users of this interface will fail if their files
   * exceed BLCKSZ * LONG_MAX bytes, but that is quite a lot; we don't work
   * with tables bigger than that, either...
   *
   * Result is 0 if OK, EOF if not.  Logical position is not moved if an
   * impossible seek is attempted.
   */
  int
! BufFileSeekBlock(BufFile *file, BlockNumber blknum)
  {
      return BufFileSeek(file,
                         (int) (blknum / RELSEG_SIZE),
!                        ((off_t)blknum % RELSEG_SIZE) * BLCKSZ,
                         SEEK_SET);
  }

Index: src/backend/storage/file/fd.c
===================================================================
RCS file: /projects/cvsroot/pgsql/src/backend/storage/file/fd.c,v
retrieving revision 1.137
diff -c -r1.137 fd.c
*** src/backend/storage/file/fd.c    6 Mar 2007 02:06:14 -0000    1.137
--- src/backend/storage/file/fd.c    6 Apr 2007 12:08:47 -0000
***************
*** 128,134 ****
      File        nextFree;        /* link to next free VFD, if in freelist */
      File        lruMoreRecently;    /* doubly linked recency-of-use list */
      File        lruLessRecently;
!     long        seekPos;        /* current logical file position */
      char       *fileName;        /* name of file, or NULL for unused VFD */
      /* NB: fileName is malloc'd, and must be free'd when closing the VFD */
      int            fileFlags;        /* open(2) flags for (re)opening the file */
--- 128,134 ----
      File        nextFree;        /* link to next free VFD, if in freelist */
      File        lruMoreRecently;    /* doubly linked recency-of-use list */
      File        lruLessRecently;
!     off_t        seekPos;        /* current logical file position */
      char       *fileName;        /* name of file, or NULL for unused VFD */
      /* NB: fileName is malloc'd, and must be free'd when closing the VFD */
      int            fileFlags;        /* open(2) flags for (re)opening the file */
***************
*** 1136,1143 ****
      return pg_fsync(VfdCache[file].fd);
  }

! long
! FileSeek(File file, long offset, int whence)
  {
      int            returnCode;

--- 1136,1143 ----
      return pg_fsync(VfdCache[file].fd);
  }

! off_t
! FileSeek(File file, off_t offset, int whence)
  {
      int            returnCode;

***************
*** 1203,1209 ****
   * XXX not actually used but here for completeness
   */
  #ifdef NOT_USED
! long
  FileTell(File file)
  {
      Assert(FileIsValid(file));
--- 1203,1209 ----
   * XXX not actually used but here for completeness
   */
  #ifdef NOT_USED
! off_t
  FileTell(File file)
  {
      Assert(FileIsValid(file));
***************
*** 1214,1220 ****
  #endif

  int
! FileTruncate(File file, long offset)
  {
      int            returnCode;

--- 1214,1220 ----
  #endif

  int
! FileTruncate(File file, off_t offset)
  {
      int            returnCode;

***************
*** 1227,1233 ****
      if (returnCode < 0)
          return returnCode;

!     returnCode = ftruncate(VfdCache[file].fd, (size_t) offset);
      return returnCode;
  }

--- 1227,1233 ----
      if (returnCode < 0)
          return returnCode;

!     returnCode = ftruncate(VfdCache[file].fd, (off_t) offset);
      return returnCode;
  }

Index: src/backend/storage/smgr/md.c
===================================================================
RCS file: /projects/cvsroot/pgsql/src/backend/storage/smgr/md.c,v
retrieving revision 1.127
diff -c -r1.127 md.c
*** src/backend/storage/smgr/md.c    17 Jan 2007 16:25:01 -0000    1.127
--- src/backend/storage/smgr/md.c    6 Apr 2007 12:08:48 -0000
***************
*** 325,331 ****
  void
  mdextend(SMgrRelation reln, BlockNumber blocknum, char *buffer, bool isTemp)
  {
!     long        seekpos;
      int            nbytes;
      MdfdVec    *v;

--- 325,331 ----
  void
  mdextend(SMgrRelation reln, BlockNumber blocknum, char *buffer, bool isTemp)
  {
!     off_t        seekpos;
      int            nbytes;
      MdfdVec    *v;

***************
*** 351,360 ****
      v = _mdfd_getseg(reln, blocknum, isTemp, EXTENSION_CREATE);

  #ifndef LET_OS_MANAGE_FILESIZE
!     seekpos = (long) (BLCKSZ * (blocknum % ((BlockNumber) RELSEG_SIZE)));
!     Assert(seekpos < BLCKSZ * RELSEG_SIZE);
  #else
!     seekpos = (long) (BLCKSZ * (blocknum));
  #endif

      /*
--- 351,360 ----
      v = _mdfd_getseg(reln, blocknum, isTemp, EXTENSION_CREATE);

  #ifndef LET_OS_MANAGE_FILESIZE
!     seekpos =  (off_t)BLCKSZ * (blocknum % ((BlockNumber) RELSEG_SIZE));
!     Assert(seekpos < (off_t)BLCKSZ * RELSEG_SIZE);
  #else
!     seekpos =  (off_t)BLCKSZ * blocknum;
  #endif

      /*
***************
*** 507,523 ****
  void
  mdread(SMgrRelation reln, BlockNumber blocknum, char *buffer)
  {
!     long        seekpos;
      int            nbytes;
      MdfdVec    *v;

      v = _mdfd_getseg(reln, blocknum, false, EXTENSION_FAIL);

  #ifndef LET_OS_MANAGE_FILESIZE
!     seekpos = (long) (BLCKSZ * (blocknum % ((BlockNumber) RELSEG_SIZE)));
!     Assert(seekpos < BLCKSZ * RELSEG_SIZE);
  #else
!     seekpos = (long) (BLCKSZ * (blocknum));
  #endif

      if (FileSeek(v->mdfd_vfd, seekpos, SEEK_SET) != seekpos)
--- 507,523 ----
  void
  mdread(SMgrRelation reln, BlockNumber blocknum, char *buffer)
  {
!     off_t        seekpos;
      int            nbytes;
      MdfdVec    *v;

      v = _mdfd_getseg(reln, blocknum, false, EXTENSION_FAIL);

  #ifndef LET_OS_MANAGE_FILESIZE
!     seekpos = (off_t)BLCKSZ * (blocknum % ((BlockNumber) RELSEG_SIZE));
!     Assert(seekpos < (off_t)BLCKSZ * RELSEG_SIZE);
  #else
!     seekpos = (off_t)BLCKSZ * (blocknum);
  #endif

      if (FileSeek(v->mdfd_vfd, seekpos, SEEK_SET) != seekpos)
***************
*** 571,577 ****
  void
  mdwrite(SMgrRelation reln, BlockNumber blocknum, char *buffer, bool isTemp)
  {
!     long        seekpos;
      int            nbytes;
      MdfdVec    *v;

--- 571,577 ----
  void
  mdwrite(SMgrRelation reln, BlockNumber blocknum, char *buffer, bool isTemp)
  {
!     off_t        seekpos;
      int            nbytes;
      MdfdVec    *v;

***************
*** 583,592 ****
      v = _mdfd_getseg(reln, blocknum, isTemp, EXTENSION_FAIL);

  #ifndef LET_OS_MANAGE_FILESIZE
!     seekpos = (long) (BLCKSZ * (blocknum % ((BlockNumber) RELSEG_SIZE)));
!     Assert(seekpos < BLCKSZ * RELSEG_SIZE);
  #else
!     seekpos = (long) (BLCKSZ * (blocknum));
  #endif

      if (FileSeek(v->mdfd_vfd, seekpos, SEEK_SET) != seekpos)
--- 583,592 ----
      v = _mdfd_getseg(reln, blocknum, isTemp, EXTENSION_FAIL);

  #ifndef LET_OS_MANAGE_FILESIZE
!     seekpos = (off_t)BLCKSZ * (blocknum % ((BlockNumber) RELSEG_SIZE));
!     Assert(seekpos < (off_t)BLCKSZ * RELSEG_SIZE);
  #else
!     seekpos = (off_t)BLCKSZ * (blocknum);
  #endif

      if (FileSeek(v->mdfd_vfd, seekpos, SEEK_SET) != seekpos)
***************
*** 1297,1303 ****
  static BlockNumber
  _mdnblocks(SMgrRelation reln, MdfdVec *seg)
  {
!     long        len;

      len = FileSeek(seg->mdfd_vfd, 0L, SEEK_END);
      if (len < 0)
--- 1297,1303 ----
  static BlockNumber
  _mdnblocks(SMgrRelation reln, MdfdVec *seg)
  {
!     off_t        len;

      len = FileSeek(seg->mdfd_vfd, 0L, SEEK_END);
      if (len < 0)
Index: src/backend/utils/sort/tuplestore.c
===================================================================
RCS file: /projects/cvsroot/pgsql/src/backend/utils/sort/tuplestore.c,v
retrieving revision 1.30
diff -c -r1.30 tuplestore.c
*** src/backend/utils/sort/tuplestore.c    5 Jan 2007 22:19:47 -0000    1.30
--- src/backend/utils/sort/tuplestore.c    6 Apr 2007 12:08:49 -0000
***************
*** 130,143 ****
      bool        eof_reached;    /* read reached EOF (always valid) */
      int            current;        /* next array index (valid if INMEM) */
      int            readpos_file;    /* file# (valid if WRITEFILE and not eof) */
!     long        readpos_offset; /* offset (valid if WRITEFILE and not eof) */
      int            writepos_file;    /* file# (valid if READFILE) */
!     long        writepos_offset;    /* offset (valid if READFILE) */

      /* markpos_xxx holds marked position for mark and restore */
      int            markpos_current;    /* saved "current" */
      int            markpos_file;    /* saved "readpos_file" */
!     long        markpos_offset; /* saved "readpos_offset" */
  };

  #define COPYTUP(state,tup)    ((*(state)->copytup) (state, tup))
--- 130,143 ----
      bool        eof_reached;    /* read reached EOF (always valid) */
      int            current;        /* next array index (valid if INMEM) */
      int            readpos_file;    /* file# (valid if WRITEFILE and not eof) */
!     off_t        readpos_offset; /* offset (valid if WRITEFILE and not eof) */
      int            writepos_file;    /* file# (valid if READFILE) */
!     off_t        writepos_offset;    /* offset (valid if READFILE) */

      /* markpos_xxx holds marked position for mark and restore */
      int            markpos_current;    /* saved "current" */
      int            markpos_file;    /* saved "readpos_file" */
!     off_t        markpos_offset; /* saved "readpos_offset" */
  };

  #define COPYTUP(state,tup)    ((*(state)->copytup) (state, tup))
Index: src/include/storage/buffile.h
===================================================================
RCS file: /projects/cvsroot/pgsql/src/include/storage/buffile.h,v
retrieving revision 1.20
diff -c -r1.20 buffile.h
*** src/include/storage/buffile.h    5 Jan 2007 22:19:57 -0000    1.20
--- src/include/storage/buffile.h    6 Apr 2007 12:08:49 -0000
***************
*** 26,31 ****
--- 26,34 ----
  #ifndef BUFFILE_H
  #define BUFFILE_H

+ #include <sys/types.h>
+ #include "block.h"
+
  /* BufFile is an opaque type whose details are not known outside buffile.c. */

  typedef struct BufFile BufFile;
***************
*** 38,45 ****
  extern void BufFileClose(BufFile *file);
  extern size_t BufFileRead(BufFile *file, void *ptr, size_t size);
  extern size_t BufFileWrite(BufFile *file, void *ptr, size_t size);
! extern int    BufFileSeek(BufFile *file, int fileno, long offset, int whence);
! extern void BufFileTell(BufFile *file, int *fileno, long *offset);
! extern int    BufFileSeekBlock(BufFile *file, long blknum);

  #endif   /* BUFFILE_H */
--- 41,48 ----
  extern void BufFileClose(BufFile *file);
  extern size_t BufFileRead(BufFile *file, void *ptr, size_t size);
  extern size_t BufFileWrite(BufFile *file, void *ptr, size_t size);
! extern int    BufFileSeek(BufFile *file, int fileno, off_t offset, int whence);
! extern void BufFileTell(BufFile *file, int *fileno, off_t *offset);
! extern int    BufFileSeekBlock(BufFile *file, BlockNumber blknum);

  #endif   /* BUFFILE_H */
Index: src/include/storage/fd.h
===================================================================
RCS file: /projects/cvsroot/pgsql/src/include/storage/fd.h,v
retrieving revision 1.57
diff -c -r1.57 fd.h
*** src/include/storage/fd.h    5 Jan 2007 22:19:57 -0000    1.57
--- src/include/storage/fd.h    6 Apr 2007 12:08:50 -0000
***************
*** 67,74 ****
  extern int    FileRead(File file, char *buffer, int amount);
  extern int    FileWrite(File file, char *buffer, int amount);
  extern int    FileSync(File file);
! extern long FileSeek(File file, long offset, int whence);
! extern int    FileTruncate(File file, long offset);

  /* Operations that allow use of regular stdio --- USE WITH CAUTION */
  extern FILE *AllocateFile(const char *name, const char *mode);
--- 67,74 ----
  extern int    FileRead(File file, char *buffer, int amount);
  extern int    FileWrite(File file, char *buffer, int amount);
  extern int    FileSync(File file);
! extern off_t FileSeek(File file, off_t offset, int whence);
! extern int    FileTruncate(File file, off_t offset);

  /* Operations that allow use of regular stdio --- USE WITH CAUTION */
  extern FILE *AllocateFile(const char *name, const char *mode);

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